Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cpsf1Q9EPU4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Gm14057-201ENSMUST00000120631 482 ntBASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Gm5479-201ENSMUST00000160578 435 ntBASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Olfr286-202ENSMUST00000205305 969 ntBASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf1Q9EPU4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Gm8116-201ENSMUST00000182917 1201 ntBASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Gm7774-201ENSMUST00000200064 533 ntBASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf1Q9EPU4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf1Q9EPU4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf1Q9EPU4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms