Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Gm8344-201ENSMUST00000119813 856 ntBASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Gm19164-201ENSMUST00000210667 640 ntBASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdc40Q9DC48 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.13□□□□□ -0.15
Cdc40Q9DC48 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Gm27646-201ENSMUST00000183989 110 ntBASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdc40Q9DC48 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Gm6736-201ENSMUST00000166583 948 ntBASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Gm27702-201ENSMUST00000184512 56 ntBASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdc40Q9DC48 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms