Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Gm11025-201ENSMUST00000140773 466 ntBASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rsph3bQ9DA80 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rsph3bQ9DA80 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.65■□□□□ 0.26
Rsph3bQ9DA80 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rsph3bQ9DA80 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph3bQ9DA80 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph3bQ9DA80 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms