Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm43767-201ENSMUST00000198933 381 ntBASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc7Q9D541 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.78■□□□□ 0.44
Ccdc7Q9D541 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Gm5682-201ENSMUST00000173402 505 ntBASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Gm28033-201ENSMUST00000184224 96 ntBASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc7Q9D541 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Gm6089-201ENSMUST00000197666 938 ntBASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc7Q9D541 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Ccdc7Q9D541 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ccdc7Q9D541 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc7Q9D541 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc7Q9D541 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc7Q9D541 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.77■□□□□ 0.43
Ccdc7Q9D541 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc7Q9D541 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc7Q9D541 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc7Q9D541 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc7Q9D541 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms