Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Gm37153-201ENSMUST00000193637 231 ntBASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
5530400C23RikQ9D3I0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Gm18195-201ENSMUST00000207604 706 ntBASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
5530400C23RikQ9D3I0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
5530400C23RikQ9D3I0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Mir5131-201ENSMUST00000175426 93 ntBASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
5530400C23RikQ9D3I0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms