Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx47Q9CWX9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx47Q9CWX9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Gm13436-201ENSMUST00000120418 567 ntBASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Gm30025-201ENSMUST00000218555 728 ntBASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx47Q9CWX9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Ddx47Q9CWX9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx47Q9CWX9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ddx47Q9CWX9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ddx47Q9CWX9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms