Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm7Q9CQQ8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Lsm7Q9CQQ8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.35■□□□□ 0.05
Lsm7Q9CQQ8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm7Q9CQQ8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm7Q9CQQ8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm7Q9CQQ8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm7Q9CQQ8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm7Q9CQQ8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Lsm7Q9CQQ8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 App-207ENSMUST00000227737 2827 ntBASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Mir1895-201ENSMUST00000122615 79 ntBASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Gm2272-201ENSMUST00000194903 582 ntBASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm7Q9CQQ8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Gm27494-201ENSMUST00000184735 189 ntBASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm7Q9CQQ8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms