Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Gm10060-201ENSMUST00000212002 111 ntBASIC15.1■□□□□ 0.01
Trim33Q99PP7 Mzt1-203ENSMUST00000227948 952 ntBASIC15.1■□□□□ 0.01
Trim33Q99PP7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim33Q99PP7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Gm7222-201ENSMUST00000117512 906 ntBASIC15.09■□□□□ 0.01
Trim33Q99PP7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.09■□□□□ 0.01
Trim33Q99PP7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Gm18195-201ENSMUST00000207604 706 ntBASIC15.09■□□□□ 0.01
Trim33Q99PP7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim33Q99PP7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.09■□□□□ 0.01
Trim33Q99PP7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim33Q99PP7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim33Q99PP7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.08■□□□□ 0.01
Trim33Q99PP7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.08■□□□□ 0.01
Trim33Q99PP7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.08■□□□□ 0.01
Trim33Q99PP7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim33Q99PP7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.08■□□□□ 0.01
Trim33Q99PP7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.08■□□□□ 0
Trim33Q99PP7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim33Q99PP7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Trim33Q99PP7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.08■□□□□ 0
Trim33Q99PP7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.08■□□□□ 0
Trim33Q99PP7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.08■□□□□ 0
Trim33Q99PP7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.08■□□□□ 0
Trim33Q99PP7 Gm6550-201ENSMUST00000187574 993 ntBASIC15.08■□□□□ 0
Trim33Q99PP7 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.08■□□□□ 0
Trim33Q99PP7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Trim33Q99PP7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim33Q99PP7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim33Q99PP7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trim33Q99PP7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Grk6-207ENSMUST00000225925 2769 ntBASIC15.07■□□□□ 0
Trim33Q99PP7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.07■□□□□ 0
Trim33Q99PP7 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.07■□□□□ 0
Trim33Q99PP7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.07■□□□□ 0
Trim33Q99PP7 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.07■□□□□ 0
Trim33Q99PP7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim33Q99PP7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms