Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Gm10766-202ENSMUST00000194123 606 ntBASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh23Q99PF4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Gm17420-201ENSMUST00000164753 153 ntBASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Snora78-201ENSMUST00000158630 128 ntBASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh23Q99PF4 Gm12390-201ENSMUST00000117897 397 ntBASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.28■□□□□ 0.04
Cdh23Q99PF4 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Gm27701-201ENSMUST00000184498 110 ntBASIC15.28■□□□□ 0.04
Cdh23Q99PF4 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh23Q99PF4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Gm26461-201ENSMUST00000175064 290 ntBASIC15.27■□□□□ 0.04
Cdh23Q99PF4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh23Q99PF4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.27■□□□□ 0.03
Cdh23Q99PF4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh23Q99PF4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh23Q99PF4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh23Q99PF4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh23Q99PF4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh23Q99PF4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.27■□□□□ 0.03
Cdh23Q99PF4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms