Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3b3Q921M3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3b3Q921M3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3b3Q921M3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sf3b3Q921M3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Gm9063-201ENSMUST00000223299 582 ntBASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sf3b3Q921M3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Gm23547-201ENSMUST00000158210 271 ntBASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Gm27533-201ENSMUST00000183800 152 ntBASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Gm27680-201ENSMUST00000184192 160 ntBASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sf3b3Q921M3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Gm13823-201ENSMUST00000119930 345 ntBASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Gm5479-201ENSMUST00000160578 435 ntBASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Gm5866-201ENSMUST00000177881 973 ntBASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.18■□□□□ 0.5
Sf3b3Q921M3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Gm14767-201ENSMUST00000121559 586 ntBASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sf3b3Q921M3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms