Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha2Q91Y17 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Gm25911-201ENSMUST00000157621 56 ntBASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha2Q91Y17 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha2Q91Y17 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Pcdha2Q91Y17 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Gm9385-201ENSMUST00000117563 472 ntBASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Gm27301-201ENSMUST00000184012 127 ntBASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha2Q91Y17 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms