Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Gm5682-201ENSMUST00000173402 505 ntBASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha3Q91Y16 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha3Q91Y16 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms