Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha8Q91Y12 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.85□□□□□ -0.03
Pcdha8Q91Y12 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha8Q91Y12 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha8Q91Y12 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha8Q91Y12 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha8Q91Y12 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha8Q91Y12 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha8Q91Y12 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdha8Q91Y12 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdha8Q91Y12 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha8Q91Y12 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdha8Q91Y12 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Gm13418-201ENSMUST00000119097 944 ntBASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Rps4l-201ENSMUST00000071745 943 ntBASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdha8Q91Y12 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Gm27646-201ENSMUST00000183989 110 ntBASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Gm6296-201ENSMUST00000222599 943 ntBASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdha8Q91Y12 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdha8Q91Y12 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha8Q91Y12 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdha8Q91Y12 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms