Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Gm5364-201ENSMUST00000216789 889 ntBASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdha9Q91Y11 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdha9Q91Y11 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdha9Q91Y11 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.14■□□□□ 0.18
Pcdha9Q91Y11 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdha9Q91Y11 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdha9Q91Y11 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Gm18206-201ENSMUST00000207027 926 ntBASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdha9Q91Y11 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 Gm43767-201ENSMUST00000198933 381 ntBASIC16.12■□□□□ 0.17
Pcdha9Q91Y11 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms