Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga9Q91XX9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Gm14494-201ENSMUST00000118786 435 ntBASIC15.04■□□□□ -0
Pcdhga9Q91XX9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Gm6736-201ENSMUST00000166583 948 ntBASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Pcdhga9Q91XX9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga9Q91XX9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhga9Q91XX9 Gm2756-201ENSMUST00000195851 400 ntBASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms