Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Gm14494-201ENSMUST00000118786 435 ntBASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Gm37153-201ENSMUST00000193637 231 ntBASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Gm19164-201ENSMUST00000210667 640 ntBASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Retreg1dQ8VE91 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retreg1dQ8VE91 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retreg1dQ8VE91 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.08■□□□□ 0.01
Retreg1dQ8VE91 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retreg1dQ8VE91 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retreg1dQ8VE91 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Retreg1dQ8VE91 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.08■□□□□ 0
Retreg1dQ8VE91 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retreg1dQ8VE91 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.07■□□□□ 0
Retreg1dQ8VE91 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Retreg1dQ8VE91 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Retreg1dQ8VE91 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms