Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Gm8097-201ENSMUST00000117903 829 ntBASIC15.35■□□□□ 0.05
Clip4Q8CI96 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.35■□□□□ 0.05
Clip4Q8CI96 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.35■□□□□ 0.05
Clip4Q8CI96 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Clip4Q8CI96 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.35■□□□□ 0.05
Clip4Q8CI96 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clip4Q8CI96 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.34■□□□□ 0.05
Clip4Q8CI96 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.34■□□□□ 0.05
Clip4Q8CI96 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clip4Q8CI96 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clip4Q8CI96 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clip4Q8CI96 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm8825-201ENSMUST00000182565 998 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm4518-201ENSMUST00000182638 718 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.33■□□□□ 0.04
Clip4Q8CI96 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Clip4Q8CI96 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clip4Q8CI96 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms