Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rftn2Q8CHX7 Mir6990-201ENSMUST00000183724 91 ntBASIC16.1■□□□□ 0.17
Rftn2Q8CHX7 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.1■□□□□ 0.17
Rftn2Q8CHX7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rftn2Q8CHX7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rftn2Q8CHX7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rftn2Q8CHX7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rftn2Q8CHX7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.1■□□□□ 0.17
Rftn2Q8CHX7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rftn2Q8CHX7 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Gm18737-201ENSMUST00000173594 937 ntBASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Gm44335-201ENSMUST00000196879 141 ntBASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Gm44297-201ENSMUST00000198304 141 ntBASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Gm44346-201ENSMUST00000198851 141 ntBASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.09■□□□□ 0.17
Rftn2Q8CHX7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rftn2Q8CHX7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rftn2Q8CHX7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rftn2Q8CHX7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rftn2Q8CHX7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rftn2Q8CHX7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rftn2Q8CHX7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rftn2Q8CHX7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Rftn2Q8CHX7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rftn2Q8CHX7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Gm5312-201ENSMUST00000203728 547 ntBASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Rftn2Q8CHX7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Gm6973-201ENSMUST00000117080 721 ntBASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Rftn2Q8CHX7 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rftn2Q8CHX7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms