Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h2aaQ8CGP4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist1h2aaQ8CGP4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Gm27646-201ENSMUST00000183989 110 ntBASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Gm6089-201ENSMUST00000197666 938 ntBASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hist1h2aaQ8CGP4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Gm5864-201ENSMUST00000202263 970 ntBASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hist1h2aaQ8CGP4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.33□□□□□ -0.11
Hist1h2aaQ8CGP4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h2aaQ8CGP4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h2aaQ8CGP4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h2aaQ8CGP4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h2aaQ8CGP4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist1h2aaQ8CGP4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Gm25990-201ENSMUST00000102440 86 ntBASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist1h2aaQ8CGP4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hist1h2aaQ8CGP4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms