Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.84■□□□□ 0.61
Smc5Q8CG46 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc5Q8CG46 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc5Q8CG46 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.83■□□□□ 0.6
Smc5Q8CG46 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc5Q8CG46 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc5Q8CG46 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Gm27646-201ENSMUST00000183989 110 ntBASIC18.81■□□□□ 0.6
Smc5Q8CG46 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.81■□□□□ 0.6
Smc5Q8CG46 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc5Q8CG46 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.8■□□□□ 0.6
Smc5Q8CG46 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.8■□□□□ 0.6
Smc5Q8CG46 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc5Q8CG46 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms