Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf31Q8CCF0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Thap2-203ENSMUST00000218989 527 ntBASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Prpf31Q8CCF0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prpf31Q8CCF0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Prpf31Q8CCF0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Gm15427-201ENSMUST00000117288 531 ntBASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf31Q8CCF0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf31Q8CCF0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf31Q8CCF0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf31Q8CCF0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf31Q8CCF0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf31Q8CCF0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.58■□□□□ 0.24
Prpf31Q8CCF0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms