Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Gm44771-201ENSMUST00000206975 626 ntBASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf4Q8BQZ5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf4Q8BQZ5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cpsf4Q8BQZ5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf4Q8BQZ5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cpsf4Q8BQZ5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.77□□□□□ -0.04
Cpsf4Q8BQZ5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cpsf4Q8BQZ5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf4Q8BQZ5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf4Q8BQZ5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Gm8655-201ENSMUST00000221159 852 ntBASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf4Q8BQZ5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm25990-201ENSMUST00000102440 86 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm8825-201ENSMUST00000182565 998 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm4518-201ENSMUST00000182638 718 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf4Q8BQZ5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.75□□□□□ -0.05
Cpsf4Q8BQZ5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms