Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Gm27742-201ENSMUST00000184667 60 ntBASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp2bQ8BJF9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp2bQ8BJF9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Gm25745-201ENSMUST00000174945 133 ntBASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp2bQ8BJF9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.58■□□□□ 0.09
Chmp2bQ8BJF9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp2bQ8BJF9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp2bQ8BJF9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp2bQ8BJF9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp2bQ8BJF9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Gm15165-201ENSMUST00000118140 502 ntBASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.58■□□□□ 0.08
Chmp2bQ8BJF9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms