Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Gm15358-201ENSMUST00000119249 520 ntBASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn3Q8BHH8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clrn3Q8BHH8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clrn3Q8BHH8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms