Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Samm50Q8BGH2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Samm50Q8BGH2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Samm50Q8BGH2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Samm50Q8BGH2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Samm50Q8BGH2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Samm50Q8BGH2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Samm50Q8BGH2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Samm50Q8BGH2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Gm8097-201ENSMUST00000117903 829 ntBASIC17.83■□□□□ 0.44
Samm50Q8BGH2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Samm50Q8BGH2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm7862-201ENSMUST00000121461 292 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm4535-201ENSMUST00000182274 558 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm8825-201ENSMUST00000182565 998 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm4518-201ENSMUST00000182638 718 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Gm10355-201ENSMUST00000097146 517 ntBASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Samm50Q8BGH2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms