Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Gm9682-201ENSMUST00000197505 556 ntBASIC15.01□□□□□ -0.01
Ubp1Q811S7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.01□□□□□ -0.01
Ubp1Q811S7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubp1Q811S7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Gm11764-201ENSMUST00000120221 623 ntBASIC15□□□□□ -0.01
Ubp1Q811S7 Gm18489-201ENSMUST00000172565 551 ntBASIC15□□□□□ -0.01
Ubp1Q811S7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15□□□□□ -0.01
Ubp1Q811S7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15□□□□□ -0.01
Ubp1Q811S7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15□□□□□ -0.01
Ubp1Q811S7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubp1Q811S7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.99□□□□□ -0.01
Ubp1Q811S7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Gm4899-201ENSMUST00000178708 719 ntBASIC14.99□□□□□ -0.01
Ubp1Q811S7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Gm7787-201ENSMUST00000216858 688 ntBASIC14.99□□□□□ -0.01
Ubp1Q811S7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ubp1Q811S7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.98□□□□□ -0.01
Ubp1Q811S7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubp1Q811S7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms