Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Usp8Q80U87 Gm27357-201ENSMUST00000183754 135 ntBASIC15.3■□□□□ 0.04
Usp8Q80U87 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.3■□□□□ 0.04
Usp8Q80U87 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.3■□□□□ 0.04
Usp8Q80U87 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.3■□□□□ 0.04
Usp8Q80U87 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.3■□□□□ 0.04
Usp8Q80U87 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Usp8Q80U87 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Usp8Q80U87 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm8825-201ENSMUST00000182565 998 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm4518-201ENSMUST00000182638 718 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp8Q80U87 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.29■□□□□ 0.04
Usp8Q80U87 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.29■□□□□ 0.04
Usp8Q80U87 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp8Q80U87 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp8Q80U87 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.28■□□□□ 0.04
Usp8Q80U87 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Gm14859-201ENSMUST00000117752 357 ntBASIC15.28■□□□□ 0.04
Usp8Q80U87 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp8Q80U87 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.28■□□□□ 0.04
Usp8Q80U87 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.28■□□□□ 0.04
Usp8Q80U87 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Usp8Q80U87 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp8Q80U87 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp8Q80U87 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Usp8Q80U87 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp8Q80U87 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp8Q80U87 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.27■□□□□ 0.04
Usp8Q80U87 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp8Q80U87 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp8Q80U87 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp8Q80U87 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp8Q80U87 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Usp8Q80U87 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms