Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh8Q7TSK3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh8Q7TSK3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh8Q7TSK3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh8Q7TSK3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Gm13597-201ENSMUST00000121239 375 ntBASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh8Q7TSK3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms