Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Timd4Q6U7R4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Gm27300-201ENSMUST00000184085 97 ntBASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Gm27335-201ENSMUST00000184758 97 ntBASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Timd4Q6U7R4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Gm14140-201ENSMUST00000119999 995 ntBASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Gm10499-201ENSMUST00000174094 934 ntBASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Gm7787-201ENSMUST00000216858 688 ntBASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Timd4Q6U7R4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Gm25925-201ENSMUST00000158314 306 ntBASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.1□□□□□ -0.15
Timd4Q6U7R4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms