Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Snrnp40Q6PE01 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Snrnp40Q6PE01 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Snrnp40Q6PE01 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Snrnp40Q6PE01 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Snrnp40Q6PE01 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Gm14719-201ENSMUST00000121891 340 ntBASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Gm15487-201ENSMUST00000122373 465 ntBASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Gm18766-201ENSMUST00000189811 808 ntBASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Gm44855-201ENSMUST00000205725 362 ntBASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Snrnp40Q6PE01 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.32□□□□□ -0.28
Snrnp40Q6PE01 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Gm7653-201ENSMUST00000214567 508 ntBASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Syt7-204ENSMUST00000223586 1344 ntBASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Snrnp40Q6PE01 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms