Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Gm2274-201ENSMUST00000184539 609 ntBASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf220Q6PDX6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Gm30025-201ENSMUST00000218555 728 ntBASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf220Q6PDX6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf220Q6PDX6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms