Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcc2Q6PDG5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Gm5682-201ENSMUST00000173402 505 ntBASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarcc2Q6PDG5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smarcc2Q6PDG5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smarcc2Q6PDG5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Smarcc2Q6PDG5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Gm27628-201ENSMUST00000184911 107 ntBASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Gm5364-201ENSMUST00000216789 889 ntBASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcc2Q6PDG5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms