Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcd3Q6P9Z1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Gm14722-201ENSMUST00000118943 689 ntBASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Olfr129-201ENSMUST00000122318 993 ntBASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Gm27742-201ENSMUST00000184667 60 ntBASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcd3Q6P9Z1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcd3Q6P9Z1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcd3Q6P9Z1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms