Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Efs-202ENSMUST00000227037 2540 ntBASIC17.05■□□□□ 0.32
Abcf1Q6P542 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.05■□□□□ 0.32
Abcf1Q6P542 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf1Q6P542 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Gm24589-201ENSMUST00000116692 94 ntBASIC17.04■□□□□ 0.32
Abcf1Q6P542 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.04■□□□□ 0.32
Abcf1Q6P542 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.04■□□□□ 0.32
Abcf1Q6P542 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.04■□□□□ 0.32
Abcf1Q6P542 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.04■□□□□ 0.32
Abcf1Q6P542 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Abcf1Q6P542 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.03■□□□□ 0.32
Abcf1Q6P542 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.03■□□□□ 0.32
Abcf1Q6P542 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.03■□□□□ 0.32
Abcf1Q6P542 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Abcf1Q6P542 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf1Q6P542 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms