Protein–RNA interactions for Protein: Q6NS46

Pdcd11, Protein RRP5 homolog, mousemouse

Known RBP Predictions only

Length 1,862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdcd11Q6NS46 Gm10766-202ENSMUST00000194123 606 ntBASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 AY702102-202ENSMUST00000194651 1173 ntBASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 AC238811.3-201ENSMUST00000225422 709 ntBASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdcd11Q6NS46 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Gm9726-201ENSMUST00000180321 678 ntBASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdcd11Q6NS46 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Pdcd11Q6NS46 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pdcd11Q6NS46 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Gm37166-201ENSMUST00000195473 2474 ntBASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Gm37748-201ENSMUST00000194379 1140 ntBASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdcd11Q6NS46 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Gm11918-201ENSMUST00000121660 179 ntBASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Gm33320-201ENSMUST00000192232 530 ntBASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Gm37917-201ENSMUST00000194711 392 ntBASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Trav13-3-201ENSMUST00000117226 336 ntBASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdcd11Q6NS46 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Gm27701-201ENSMUST00000184498 110 ntBASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Gm18062-201ENSMUST00000208020 547 ntBASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Gm18055-201ENSMUST00000208254 547 ntBASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 AC125350.2-201ENSMUST00000224737 727 ntBASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Gm9899-201ENSMUST00000065519 555 ntBASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdcd11Q6NS46 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Gm5303-201ENSMUST00000117943 1252 ntBASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdcd11Q6NS46 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC21.66■■□□□ 1.06
Pdcd11Q6NS46 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pdcd11Q6NS46 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pdcd11Q6NS46 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdcd11Q6NS46 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC21.66■■□□□ 1.06
Pdcd11Q6NS46 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Pdcd11Q6NS46 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Pdcd11Q6NS46 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms