Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt40Q6IFX3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm22065-201ENSMUST00000103753 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm22066-201ENSMUST00000103761 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm24932-201ENSMUST00000103763 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm24115-201ENSMUST00000103799 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm22190-201ENSMUST00000103827 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm22191-201ENSMUST00000103831 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm25287-201ENSMUST00000103846 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm24721-201ENSMUST00000103849 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm22918-201ENSMUST00000103855 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm28018-201ENSMUST00000103869 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm26399-201ENSMUST00000103937 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm15483-201ENSMUST00000120338 456 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm25349-201ENSMUST00000177728 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm23616-201ENSMUST00000177797 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm25871-201ENSMUST00000177816 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm24752-201ENSMUST00000178240 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm24496-201ENSMUST00000178287 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm25649-201ENSMUST00000178476 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm25548-201ENSMUST00000178681 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm23147-201ENSMUST00000178841 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm26095-201ENSMUST00000179270 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm22171-201ENSMUST00000179283 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm23936-201ENSMUST00000179354 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm22619-201ENSMUST00000179516 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm25255-201ENSMUST00000179579 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm24755-201ENSMUST00000179691 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm26506-201ENSMUST00000179692 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm25086-201ENSMUST00000179931 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm23243-201ENSMUST00000180047 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm24659-201ENSMUST00000180212 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm24169-201ENSMUST00000180244 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm23689-201ENSMUST00000180354 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm27359-201ENSMUST00000184153 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm27785-201ENSMUST00000184268 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm27466-201ENSMUST00000184396 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm27703-201ENSMUST00000184836 110 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt40Q6IFX3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Gm13616-201ENSMUST00000120600 222 ntBASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Gm18737-201ENSMUST00000173594 937 ntBASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Krt40Q6IFX3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms