Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Gm14042-201ENSMUST00000120139 833 ntBASIC17.68■□□□□ 0.42
Scaf8Q6DID3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scaf8Q6DID3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Gm8515-201ENSMUST00000194852 576 ntBASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Gm44719-201ENSMUST00000206404 149 ntBASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Gm6007-201ENSMUST00000208170 823 ntBASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scaf8Q6DID3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Gm14722-201ENSMUST00000118943 689 ntBASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Gm19087-201ENSMUST00000191430 946 ntBASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scaf8Q6DID3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Gm24543-201ENSMUST00000103867 82 ntBASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Mir1897-201ENSMUST00000122581 272 ntBASIC17.65■□□□□ 0.42
Scaf8Q6DID3 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Gm42612-201ENSMUST00000197986 623 ntBASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Gm43170-201ENSMUST00000199827 612 ntBASIC17.65■□□□□ 0.42
Scaf8Q6DID3 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scaf8Q6DID3 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms