Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.86■□□□□ 0.61
Irf9Q61179 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.86■□□□□ 0.61
Irf9Q61179 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.86■□□□□ 0.61
Irf9Q61179 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Irf9Q61179 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.86■□□□□ 0.61
Irf9Q61179 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Irf9Q61179 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.85■□□□□ 0.61
Irf9Q61179 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.85■□□□□ 0.61
Irf9Q61179 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.85■□□□□ 0.61
Irf9Q61179 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.85■□□□□ 0.61
Irf9Q61179 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.85■□□□□ 0.61
Irf9Q61179 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.85■□□□□ 0.61
Irf9Q61179 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.85■□□□□ 0.61
Irf9Q61179 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.85■□□□□ 0.61
Irf9Q61179 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf9Q61179 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Irf9Q61179 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Irf9Q61179 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Irf9Q61179 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.84■□□□□ 0.61
Irf9Q61179 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.84■□□□□ 0.61
Irf9Q61179 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.84■□□□□ 0.61
Irf9Q61179 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf9Q61179 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Irf9Q61179 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Irf9Q61179 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf9Q61179 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Irf9Q61179 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.83■□□□□ 0.6
Irf9Q61179 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.83■□□□□ 0.6
Irf9Q61179 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.83■□□□□ 0.6
Irf9Q61179 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Irf9Q61179 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.83■□□□□ 0.6
Irf9Q61179 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.83■□□□□ 0.6
Irf9Q61179 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf9Q61179 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf9Q61179 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Irf9Q61179 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Irf9Q61179 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Irf9Q61179 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf9Q61179 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf9Q61179 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf9Q61179 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf9Q61179 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.82■□□□□ 0.6
Irf9Q61179 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Irf9Q61179 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.82■□□□□ 0.6
Irf9Q61179 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.82■□□□□ 0.6
Irf9Q61179 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Irf9Q61179 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Irf9Q61179 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms