Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NfkbibQ60778 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.22■□□□□ 0.51
NfkbibQ60778 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NfkbibQ60778 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NfkbibQ60778 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NfkbibQ60778 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NfkbibQ60778 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.22■□□□□ 0.51
NfkbibQ60778 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NfkbibQ60778 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NfkbibQ60778 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NfkbibQ60778 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NfkbibQ60778 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.21■□□□□ 0.51
NfkbibQ60778 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NfkbibQ60778 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NfkbibQ60778 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NfkbibQ60778 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NfkbibQ60778 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NfkbibQ60778 Gm13365-201ENSMUST00000121188 973 ntBASIC18.21■□□□□ 0.51
NfkbibQ60778 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NfkbibQ60778 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NfkbibQ60778 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.21■□□□□ 0.51
NfkbibQ60778 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NfkbibQ60778 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.21■□□□□ 0.51
NfkbibQ60778 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NfkbibQ60778 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NfkbibQ60778 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NfkbibQ60778 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NfkbibQ60778 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NfkbibQ60778 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
NfkbibQ60778 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NfkbibQ60778 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NfkbibQ60778 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NfkbibQ60778 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NfkbibQ60778 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NfkbibQ60778 Gm11745-201ENSMUST00000121669 448 ntBASIC18.2■□□□□ 0.5
NfkbibQ60778 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Gm26308-201ENSMUST00000157768 69 ntBASIC18.2■□□□□ 0.5
NfkbibQ60778 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.2■□□□□ 0.5
NfkbibQ60778 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NfkbibQ60778 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NfkbibQ60778 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.19■□□□□ 0.5
NfkbibQ60778 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NfkbibQ60778 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.19■□□□□ 0.5
NfkbibQ60778 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.19■□□□□ 0.5
NfkbibQ60778 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.19■□□□□ 0.5
NfkbibQ60778 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NfkbibQ60778 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.19■□□□□ 0.5
NfkbibQ60778 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NfkbibQ60778 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NfkbibQ60778 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms