Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm11355-201ENSMUST00000121120 306 ntBASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm45058-201ENSMUST00000205810 766 ntBASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms