Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Mir7684-201ENSMUST00000183858 60 ntBASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Trim41Q5NCC3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 CT010506.4-201ENSMUST00000225457 351 ntBASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trim41Q5NCC3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Gm37748-201ENSMUST00000194379 1140 ntBASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Gm6745-201ENSMUST00000199216 526 ntBASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim41Q5NCC3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim41Q5NCC3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim41Q5NCC3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trim41Q5NCC3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms