Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf20Q5DTM8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Gm11764-201ENSMUST00000120221 623 ntBASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Gm15173-201ENSMUST00000122049 433 ntBASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf20Q5DTM8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm11452-201ENSMUST00000122376 690 ntBASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm5682-201ENSMUST00000173402 505 ntBASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm10499-201ENSMUST00000174094 934 ntBASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm6550-201ENSMUST00000187574 993 ntBASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm28659-201ENSMUST00000188013 759 ntBASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm9682-201ENSMUST00000197505 556 ntBASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf20Q5DTM8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms