Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm18055-201ENSMUST00000208254 547 ntBASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Shank3Q4ACU6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 App-207ENSMUST00000227737 2827 ntBASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Gm6266-201ENSMUST00000203844 806 ntBASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Gm9797-201ENSMUST00000052902 613 ntBASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Shank3Q4ACU6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Gm28760-201ENSMUST00000185995 736 ntBASIC18.65■□□□□ 0.58
Shank3Q4ACU6 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.65■□□□□ 0.58
Shank3Q4ACU6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Mir125a-201ENSMUST00000083545 68 ntBASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.65■□□□□ 0.58
Shank3Q4ACU6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shank3Q4ACU6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shank3Q4ACU6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shank3Q4ACU6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.64■□□□□ 0.58
Shank3Q4ACU6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank3Q4ACU6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Olfr286-202ENSMUST00000205305 969 ntBASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank3Q4ACU6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms