Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp48Q3V0C5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.81■□□□□ 0.6
Usp48Q3V0C5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Gm27430-201ENSMUST00000184585 107 ntBASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Gm44333-201ENSMUST00000197168 107 ntBASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp48Q3V0C5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp48Q3V0C5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Gm27437-201ENSMUST00000183429 107 ntBASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Gm43767-201ENSMUST00000198933 381 ntBASIC18.79■□□□□ 0.6
Usp48Q3V0C5 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp48Q3V0C5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp48Q3V0C5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp48Q3V0C5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp48Q3V0C5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Usp48Q3V0C5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp48Q3V0C5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp48Q3V0C5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms