Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Znf48Q3US17 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Gm6550-201ENSMUST00000187574 993 ntBASIC12.61□□□□□ -0.39
Znf48Q3US17 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.61□□□□□ -0.39
Znf48Q3US17 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Znf48Q3US17 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.6□□□□□ -0.39
Znf48Q3US17 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.6□□□□□ -0.39
Znf48Q3US17 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.6□□□□□ -0.39
Znf48Q3US17 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Znf48Q3US17 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Znf48Q3US17 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.6□□□□□ -0.39
Znf48Q3US17 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.6□□□□□ -0.39
Znf48Q3US17 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Znf48Q3US17 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Znf48Q3US17 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Znf48Q3US17 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Znf48Q3US17 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.59□□□□□ -0.39
Znf48Q3US17 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Znf48Q3US17 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms