Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limch1Q3UH68 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Limch1Q3UH68 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limch1Q3UH68 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.9■□□□□ 0.46
Limch1Q3UH68 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.9■□□□□ 0.46
Limch1Q3UH68 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limch1Q3UH68 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Limch1Q3UH68 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.89■□□□□ 0.45
Limch1Q3UH68 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Limch1Q3UH68 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.88■□□□□ 0.45
Limch1Q3UH68 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.88■□□□□ 0.45
Limch1Q3UH68 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.88■□□□□ 0.45
Limch1Q3UH68 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.88■□□□□ 0.45
Limch1Q3UH68 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.88■□□□□ 0.45
Limch1Q3UH68 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limch1Q3UH68 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limch1Q3UH68 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limch1Q3UH68 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.87■□□□□ 0.45
Limch1Q3UH68 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms