Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ctdnep1Q3TP92 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdnep1Q3TP92 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdnep1Q3TP92 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdnep1Q3TP92 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.56■□□□□ 0.4
Ctdnep1Q3TP92 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Ctdnep1Q3TP92 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Ctdnep1Q3TP92 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Gm13036-201ENSMUST00000117799 748 ntBASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Gm28659-201ENSMUST00000188013 759 ntBASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.54■□□□□ 0.4
Ctdnep1Q3TP92 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.53■□□□□ 0.4
Ctdnep1Q3TP92 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Carlr-201ENSMUST00000181515 2574 ntBASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctdnep1Q3TP92 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ctdnep1Q3TP92 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.52■□□□□ 0.39
Ctdnep1Q3TP92 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctdnep1Q3TP92 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ctdnep1Q3TP92 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.52■□□□□ 0.39
Ctdnep1Q3TP92 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms