Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smarcc1P97496 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Gm27680-201ENSMUST00000184192 160 ntBASIC18.95■□□□□ 0.62
Smarcc1P97496 Gm44344-201ENSMUST00000200287 129 ntBASIC18.95■□□□□ 0.62
Smarcc1P97496 Gm7775-201ENSMUST00000218871 853 ntBASIC18.95■□□□□ 0.62
Smarcc1P97496 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Smarcc1P97496 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.95■□□□□ 0.62
Smarcc1P97496 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.95■□□□□ 0.62
Smarcc1P97496 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.95■□□□□ 0.62
Smarcc1P97496 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Smarcc1P97496 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.95■□□□□ 0.62
Smarcc1P97496 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.94■□□□□ 0.62
Smarcc1P97496 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 Gm27533-201ENSMUST00000183800 152 ntBASIC18.94■□□□□ 0.62
Smarcc1P97496 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.94■□□□□ 0.62
Smarcc1P97496 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.94■□□□□ 0.62
Smarcc1P97496 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.94■□□□□ 0.62
Smarcc1P97496 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcc1P97496 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.94■□□□□ 0.62
Smarcc1P97496 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.93■□□□□ 0.62
Smarcc1P97496 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Smarcc1P97496 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smarcc1P97496 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.93■□□□□ 0.62
Smarcc1P97496 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
Smarcc1P97496 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.93■□□□□ 0.62
Smarcc1P97496 Gm27838-201ENSMUST00000184829 128 ntBASIC18.93■□□□□ 0.62
Smarcc1P97496 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.93■□□□□ 0.62
Smarcc1P97496 Gm9794-201ENSMUST00000202370 423 ntBASIC18.93■□□□□ 0.62
Smarcc1P97496 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.93■□□□□ 0.62
Smarcc1P97496 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Smarcc1P97496 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Smarcc1P97496 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.93■□□□□ 0.62
Smarcc1P97496 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Smarcc1P97496 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcc1P97496 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcc1P97496 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.92■□□□□ 0.62
Smarcc1P97496 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcc1P97496 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.92■□□□□ 0.62
Smarcc1P97496 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.92■□□□□ 0.62
Smarcc1P97496 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.92■□□□□ 0.62
Smarcc1P97496 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcc1P97496 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarcc1P97496 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.91■□□□□ 0.62
Smarcc1P97496 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Smarcc1P97496 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms