Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps45P97390 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps45P97390 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps45P97390 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps45P97390 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps45P97390 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
Vps45P97390 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps45P97390 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps45P97390 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps45P97390 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps45P97390 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps45P97390 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps45P97390 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps45P97390 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps45P97390 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps45P97390 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps45P97390 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.71■□□□□ 0.11
Vps45P97390 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Vps45P97390 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps45P97390 Gm5186-201ENSMUST00000218781 920 ntBASIC15.71■□□□□ 0.11
Vps45P97390 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.71■□□□□ 0.11
Vps45P97390 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vps45P97390 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps45P97390 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps45P97390 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.71■□□□□ 0.11
Vps45P97390 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Vps45P97390 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Vps45P97390 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps45P97390 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps45P97390 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vps45P97390 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps45P97390 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps45P97390 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps45P97390 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vps45P97390 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps45P97390 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.7■□□□□ 0.1
Vps45P97390 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Gm8318-201ENSMUST00000182954 872 ntBASIC15.7■□□□□ 0.1
Vps45P97390 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.7■□□□□ 0.1
Vps45P97390 Gm44872-201ENSMUST00000207864 420 ntBASIC15.7■□□□□ 0.1
Vps45P97390 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps45P97390 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Vps45P97390 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Vps45P97390 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.69■□□□□ 0.1
Vps45P97390 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps45P97390 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps45P97390 Gm14701-201ENSMUST00000117156 348 ntBASIC15.69■□□□□ 0.1
Vps45P97390 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.69■□□□□ 0.1
Vps45P97390 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps45P97390 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps45P97390 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps45P97390 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.69■□□□□ 0.1
Vps45P97390 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Vps45P97390 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Vps45P97390 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps45P97390 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms