Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.57■□□□□ 0.08
Ybx1P62960 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.57■□□□□ 0.08
Ybx1P62960 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ybx1P62960 Gm5779-201ENSMUST00000218467 910 ntBASIC15.57■□□□□ 0.08
Ybx1P62960 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ybx1P62960 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ybx1P62960 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ybx1P62960 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ybx1P62960 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ybx1P62960 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ybx1P62960 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ybx1P62960 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ybx1P62960 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Gm27622-201ENSMUST00000183779 60 ntBASIC15.56■□□□□ 0.08
Ybx1P62960 Gm10253-201ENSMUST00000194270 940 ntBASIC15.56■□□□□ 0.08
Ybx1P62960 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ybx1P62960 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.56■□□□□ 0.08
Ybx1P62960 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.56■□□□□ 0.08
Ybx1P62960 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ybx1P62960 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.56■□□□□ 0.08
Ybx1P62960 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ybx1P62960 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
Ybx1P62960 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.55■□□□□ 0.08
Ybx1P62960 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Ybx1P62960 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.55■□□□□ 0.08
Ybx1P62960 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ybx1P62960 Gm24158-201ENSMUST00000175263 71 ntBASIC15.55■□□□□ 0.08
Ybx1P62960 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.55■□□□□ 0.08
Ybx1P62960 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.55■□□□□ 0.08
Ybx1P62960 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.55■□□□□ 0.08
Ybx1P62960 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.55■□□□□ 0.08
Ybx1P62960 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.55■□□□□ 0.08
Ybx1P62960 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Ybx1P62960 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ybx1P62960 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.54■□□□□ 0.08
Ybx1P62960 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Ybx1P62960 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ybx1P62960 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ybx1P62960 Gm6973-201ENSMUST00000117080 721 ntBASIC15.54■□□□□ 0.08
Ybx1P62960 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.54■□□□□ 0.08
Ybx1P62960 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ybx1P62960 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.54■□□□□ 0.08
Ybx1P62960 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.54■□□□□ 0.08
Ybx1P62960 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.54■□□□□ 0.08
Ybx1P62960 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ybx1P62960 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ybx1P62960 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ybx1P62960 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ybx1P62960 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ybx1P62960 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ybx1P62960 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ybx1P62960 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms